Johnson, P. , Orton, R. and Haydon, D. (2022) Evaluating the potential of whole-genome sequencing for tracing transmission routes in experimental infections and natural outbreaks of bovine respiratory syncytial virus. [Data Collection]

Collection description

Scripts and data sets required to perform analysis of genomic diversity of BRSV samples using next-generation sequencing data.

College / School:	College of Medical Veterinary and Life Sciences > School of Biodiversity, One Health and Veterinary Medicine College of Medical Veterinary and Life Sciences > School of Infection and Immunity > Centre for Virus Research
Date Deposited:	15 Nov 2022 10:05
URI:	https://researchdata.gla.ac.uk/id/eprint/1287
Additional details Additional details Type of data: Code, Image, Spreadsheet, Text Collection period: From To 2002 2020 Date: 15 November 2022 Date type: Publication Additional information: Funding acknowledged from Swedish Research Council (Formas, Sweden, 2016-00463); European Union Horizon 2020 (SAPHIR, 633184); Biotechnology and Biological Sciences Research Council (BBSRC, UK); L’Agence Nationale de la Recherche (ANR, France); Emerging and Major Infectious Diseases of Livestock (EMIDA) project in the European Research Area Network (ERA-NET) Resource language: EN Status: Published Data Publisher: University of Glasgow Copyright holders: University of Glasgow, Swedish University of Agricultural Sciences (SLU) Last Modified: 15 Nov 2022 11:10

Available Files

Data

Data_tables.zip Data_tables.zip Data_tables.zip Visible to: Anyone Content type: Data Metadata Revision: 2 Mime-Type: application/zip License: Creative Commons: Attribution 4.0 File size: 52kB

ErrorThreshFiguresAndData.zip ErrorThreshFiguresAndData.zip ErrorThreshFiguresAndData.zip Visible to: Anyone Content type: Data Metadata Revision: 2 Mime-Type: application/zip License: Creative Commons: Attribution 4.0 File size: 19MB

Figures.zip Figures.zip Figures.zip Visible to: Anyone Content type: Data Metadata Revision: 2 Mime-Type: application/zip License: Creative Commons: Attribution 4.0 File size: 1MB

NGSdata.zip NGSdata.zip NGSdata.zip Visible to: Anyone Content type: Data Metadata Revision: 2 Mime-Type: application/zip License: Creative Commons: Attribution 4.0 File size: 137MB

R_scripts.zip R_scripts.zip R_scripts.zip Visible to: Anyone Content type: Data Metadata Revision: 2 Mime-Type: application/zip License: Creative Commons: Attribution 4.0 File size: 34kB

refseqs.zip refseqs.zip refseqs.zip Visible to: Anyone Content type: Data Metadata Revision: 2 Mime-Type: application/zip License: Creative Commons: Attribution 4.0 File size: 46kB

Read me

ReadMe.txt ReadMe.txt ReadMe.txt Visible to: Anyone Content type: Read me Metadata Revision: 2 Mime-Type: text/x-diff License: Creative Commons: Attribution 4.0 File size: 5kB

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