Hierarchical Bayesian Regression (HBR) and Analytic Gradient Calculation (GCGP)

351 36 943 2 5502 document 943 HBR_Code.zip application/x-zip 309d32aa89dad42a9f4ea9f6658c2158 MD5 31356527 2016-09-09 08:02:09 https://researchdata.gla.ac.uk/351/1/HBR_Code.zip 351 1 1 application/x-zip Software en public bsd_3

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data 944 2 5505 document 944 README.txt text/plain bbc67b66ae9190986400f08225fdfd27 MD5 17527 2016-09-09 08:03:05 https://researchdata.gla.ac.uk/351/2/README.txt 351 2 2 text/plain Text en public cc_by_4

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readme 945 1 5508 document 945 indexcodes.txt text/plain 3a78fbe19c174625af02c74c0caf8e86 MD5 4741 2016-09-09 08:03:19 https://researchdata.gla.ac.uk/351/3/indexcodes.txt 351 3 3 text/plain other Generate index codes conversion from Text to indexcodes en public

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http://eprints.org/relation/isVersionOf https://researchdata.gla.ac.uk/id/document/944 http://eprints.org/relation/isVolatileVersionOf https://researchdata.gla.ac.uk/id/document/944 http://eprints.org/relation/isIndexCodesVersionOf https://researchdata.gla.ac.uk/id/document/944 archive 5 disk0/00/00/03/51 2016-09-09 08:13:24 2025-05-22 10:13:28 2016-09-09 08:13:24 data_collection show Aderhold Andrej 31743 Husmeier Dirk 17166 0000-0003-1673-7413 Grzegorczyk M. http://www.loc.gov/loc.terms/relators/CRE Vanhatalo Jarno http://www.loc.gov/loc.terms/relators/CRE Riihimäki Jaakko http://www.loc.gov/loc.terms/relators/CRE Hartikainen Jouni http://www.loc.gov/loc.terms/relators/CRE Jylänki Pasi http://www.loc.gov/loc.terms/relators/CRE Tolvanen Ville http://www.loc.gov/loc.terms/relators/CRE Vehtari Aki glaresearchdata:2016-09-09-351 Hierarchical Bayesian Regression (HBR) and Analytic Gradient Calculation (GCGP) pub 30500000 The software contains two components: The HBR code and the gradient calculation code (GCGP) that uses the Gaussian Process package GPstuff (http://research.cs.aalto.fi/pml/software/gpstuff/) by: Jarno Vanhatalo, Jaakko Riihimäki, Jouni Hartikainen, Pasi Jylänki, Ville Tolvanen, and Aki Vehtari (2013). GPstuff: Bayesian Modeling with Gaussian Processes. Journal of Machine Learning Research, 14(Apr):1175-1179 The HBR code was originally written by Marco Grzegorczyk, and adapted by Andrej Aderhold for the Biopepa data. It is located in the subfolder 'HBR/', see Section A. for details. The GCGP code was written by Andrej Aderhold, and uses sub-routines from the GPstuff, version 4.4 software that is under the GNU GPL license. It is located in the subfolder GCGP, see Section B. for details. 2016-09-09 published University of Glasgow 10.5525/gla.researchdata.351 Software 63329 1 Computational inference in systems biology Dirk Husmeier Engineering & Physical Sciences Research Council (EPSRC) EP/L020319/1 M&S - STATISTICS 59237 1 TIMET: Linking the clock to metabolism Dirk Husmeier European Commission (EC) FP7 245143 TIME M&S - STATISTICS FALSE en HBR is available for use under the following license, commonly known as the 3-clause (or "modified") BSD license: Copyright (c) 2013-2016 Marco Gzegorczyk and Andrej Aderhold GCGP software is distributed under the GNU General Public License (version 3 or later); please refer to the file License.txt, included with the software, for details. http://dx.doi.org/10.5525/gla.researchdata.374 data https://www.degruyter.com/view/j/sagmb.2014.13.issue-3/sagmb-2013-0051/sagmb-2013-0051.xml article http://dx.doi.org/10.1515/sagmb-2014-0041 article http://dx.doi.org/10.1007/s11222-016-9668-8 article 2026-09-09 R FALSE FALSE Inferring bi-directional interactions between circadian clock genes and metabolism with model ensembles http://eprints.gla.ac.uk/id/eprint/102870 Statistical inference of regulatory networks for circadian regulation http://eprints.gla.ac.uk/id/eprint/95697