Read me file for thoughs_of_self_harm.assoc.logistic.gz
The file thoughs_of_self_harm.assoc.logistic.gz refers to the binary outcome of thoughts of self-harm. The items on the scale are:
0: no suicidal thoughts
1: thoughts of self-harm
The column names are defined as:
SNP: rs number or ID string
CHR: chromosome
BP: physical (base pair) position
A1: the tested allele
TEST: the type of test performed
NMISS: the number of non-missing individuals used for the test
BETA: the effect size of A1
SE: standard error of effect size
L95: the lower confidence interval
u95: the upper confidence interval
STAT: the test statistic of the SNP
P: the p-value of the SNP
F_A: frequency of affected individuals
F_U: frequency of unaffected individuals
A2: the other allele
MAF: frequency of the A1 allele
INFO: imputation score of the SNP
NCHROBS: Number of allele observations