notebook=https://colab.research.google.com/github/sokrypton/ColabFold/blob/main/beta/AlphaFold2_advanced.ipynb
sequence=FFKGVKDRVKGKSDPYHATSGALSPAKDCGSQKYAYFNGCSSPTAPLSPMSPPGYKLVTGDRNNSSCRNYNKQASEQNWANYSAEQNRMGQAGSTISNSHAQPFDFPDDNQNSKKLAAGHELQPLAIVDQRPSSRASSRASSRPRPDDLEI:ISSGSGSLRTSQKRSLYVRALFDYDKTKDSGLPSQGLNFKFGDILHVINASDDEWWQARQVTPDGESDEVGVIPSKRRVEKKERARLKTVKFNSKTRDKGEIPDDMGSKGLKHVTSNASDSESSYRGQEEYVLSYEPVNQQEVNYTRPVIILGPMKDRINDDLISEFPDKFGSCVPHTTRPKRDYEVDGRDYHFVT
msa_method=mmseqs2
homooligomer=1:1
pair_mode=unpaired
max_msa=512:1024
subsample_msa=True
num_relax=5
use_turbo=True
use_ptm=True
rank_by=pTMscore
num_models=5
num_samples=1
num_ensemble=1
max_recycles=3
tol=0
is_training=False
use_templates=False
-------------------------------------------------
rank_1_model_1_ptm_seed_0 pLDDT:58.97 pTMscore:0.4757
rank_2_model_3_ptm_seed_0 pLDDT:60.83 pTMscore:0.4546
rank_3_model_5_ptm_seed_0 pLDDT:59.61 pTMscore:0.4530
rank_4_model_2_ptm_seed_0 pLDDT:59.46 pTMscore:0.4519
rank_5_model_4_ptm_seed_0 pLDDT:58.96 pTMscore:0.4515
