These are the data files for “Phylogenomic inference of species and subspecies diversity in the Palearctic salamander genus Salamandra” by James D. Burgon, Miguel Vences, Sebastian Steinfartz, Sergé Bogaerts, Lucio Bonato, David Donaire-Barroso, Iñigo Martínez-Solano, Guillermo Velo-Antón, David R. Vieites, Barbara K. Mable, Kathryn R. Elmer published in Molecular Phylogenetics and Evolution (2021)

Correspondence to Kathryn.Elmer@glasgow.ac.uk/ Miguel Vences m.vences@tu-braunschweig.de

The following are archived:
nexus (nex) and phylip files for the 3475 RAD-loci, 201 individual dataset (Beast2 and RAxML)
phylip file for the 4905 RAD-loci, 89 individual dataset (Beast2 and RAxML)

Two further files are archived, these are subsets of the datasets listed above:
genpop (gen) file for 3475 RAD-loci, 150 individuals of Salamandra salamandra (PCA)
nexus (nex) file for 3475 RAD-loci, 87 individual dataset (SplitsTree)

note ELT is sample individual identifier

For all information on how the data were created, please see the publication.