##fileformat=VCFv4.2 ##fileDate=20170918 ##source="Stacks v1.46" ##INFO= ##INFO= ##FORMAT= ##FORMAT= ##FORMAT= ##FORMAT= ##INFO= #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT Awe_BSS_2375_SE_aln_sorted.q20 Awe_BSS_2376_SE_aln_sorted.q20 Awe_BSS_2378_SE_aln_sorted.q20 Awe_BSS_2379_SE_aln_sorted.q20 Awe_BSS_2380_SE_aln_sorted.q20 Awe_BSS_2381_SE_aln_sorted.q20 Awe_BSS_2382_SE_aln_sorted.q20 Awe_BSS_2383_SE_aln_sorted.q20 Awe_BSS_2384_SE_aln_sorted.q20 Awe_BSS_2385_SE_aln_sorted.q20 Awe_BSS_2387_SE_aln_sorted.q20 Awe_BSS_2388_SE_aln_sorted.q20 Awe_BSS_2389_SE_aln_sorted.q20 Awe_BSS_2396_SE_aln_sorted.q20 Awe_BSS_2397_SE_aln_sorted.q20 Awe_BSS_2399_SE_aln_sorted.q20 Awe_BSS_2404_SE_aln_sorted.q20 Awe_BSS_2405_SE_aln_sorted.q20 Awe_BSS_2407_SE_aln_sorted.q20 Awe_BSS_2408_SE_aln_sorted.q20 Awe_BSS_2415_SE_aln_sorted.q20 Awe_BSS_2416_SE_aln_sorted.q20 Awe_BSS_2417_SE_aln_sorted.q20 Awe_BSS_MCLA10_SE_aln_sorted.q20 Awe_BSS_MCLA12_SE_aln_sorted.q20 Awe_PAS_2333_SE_aln_sorted.q20 Awe_PAS_2334_SE_aln_sorted.q20 Awe_PAS_2336_SE_aln_sorted.q20 Awe_PAS_2337_SE_aln_sorted.q20 Awe_PAS_2339_SE_aln_sorted.q20 Awe_PAS_2340_SE_aln_sorted.q20 Awe_PAS_2341_SE_aln_sorted.q20 Awe_PAS_2343_SE_aln_sorted.q20 Awe_PAS_2344_SE_aln_sorted.q20 Awe_PAS_2347_SE_aln_sorted.q20 Awe_PAS_2348_SE_aln_sorted.q20 Awe_PAS_2349_SE_aln_sorted.q20 Awe_PAS_2350_SE_aln_sorted.q20 Awe_PAS_2351_SE_aln_sorted.q20 Awe_PAS_2352_SE_aln_sorted.q20 Awe_PAS_2357_r_SE_aln_sorted.q20 Awe_PAS_2358_SE_aln_sorted.q20 Awe_PAS_2359_SE_aln_sorted.q20 Awe_PAS_2360_SE_aln_sorted.q20 Awe_PAS_2362_SE_aln_sorted.q20 Awe_PAS_2390_SE_aln_sorted.q20 Awe_PAS_2391_SE_aln_sorted.q20 Awe_PAS_2394_SE_aln_sorted.q20 Awe_PAS_2402_SE_aln_sorted.q20 Awe_PAS_MCLA01_SE_aln_sorted.q20 Awe_PAS_MCLA02_SE_aln_sorted.q20 Awe_PAS_MCLA03_SE_aln_sorted.q20 Awe_PAS_MCLA04_SE_aln_sorted.q20 Dug-bn-6657_SE_aln_sorted.q20 Dug-bn-6658_SE_aln_sorted.q20 Dug-bn-6659_SE_aln_sorted.q20 Dug-bn-6660_SE_aln_sorted.q20 Dug-bn-6661_SE_aln_sorted.q20 Dug-bn-6662_SE_aln_sorted.q20 Dug-bn-6663_SE_aln_sorted.q20 Dug-bn-6664_SE_aln_sorted.q20 Dug-bn-6665_SE_aln_sorted.q20 Dug-bn-6666_SE_aln_sorted.q20 Dug-bn-6667_SE_aln_sorted.q20 Dug-bn-6668_SE_aln_sorted.q20 Dug-bn-6669_SE_aln_sorted.q20 Dug-bn-6670_SE_aln_sorted.q20 Dug-bn-6672_SE_aln_sorted.q20 Dug-bn-6673_SE_aln_sorted.q20 Dug-bn-6674_SE_aln_sorted.q20 Dug-bn-6676_SE_aln_sorted.q20 Dug-bn-6677_SE_aln_sorted.q20 Dug-bn-6678_SE_aln_sorted.q20 Dug-bn-6679_SE_aln_sorted.q20 Dug-bn-6681_SE_aln_sorted.q20 Dug-bn-6682_SE_aln_sorted.q20 Dug-bn-6683_SE_aln_sorted.q20 Dug-bn-6684_SE_aln_sorted.q20 Dug-bn-6685_SE_aln_sorted.q20 Dug-bn-6686_SE_aln_sorted.q20 Dug-bn-6687_SE_aln_sorted.q20 Dug-bn-6703_SE_aln_sorted.q20 Dug-bn-6704_SE_aln_sorted.q20 Dug-pl-6706_SE_aln_sorted.q20 Dug-pl-6708_SE_aln_sorted.q20 Dug-pl-6709_SE_aln_sorted.q20 Dug-pl-6710_SE_aln_sorted.q20 Dug-pl-6712_SE_aln_sorted.q20 Dug-pl-6715_SE_aln_sorted.q20 Dug-pl-6716_SE_aln_sorted.q20 Dug-pl-6718_SE_aln_sorted.q20 Dug-pl-6719_SE_aln_sorted.q20 Dug-pl-6723_SE_aln_sorted.q20 Dug-pl-6724_SE_aln_sorted.q20 Dug-pl-6725_SE_aln_sorted.q20 Dug-pl-6726_SE_aln_sorted.q20 Dug-pl-6727_SE_aln_sorted.q20 Dug-pl-6729_SE_aln_sorted.q20 Dug-pl-6730_SE_aln_sorted.q20 Dug-pl-6731_SE_aln_sorted.q20 Dug-pl-6732_SE_aln_sorted.q20 Dug-pl-6734_SE_aln_sorted.q20 Dug-pl-6735_SE_aln_sorted.q20 Dug-pl-6738_SE_aln_sorted.q20 Dug-pl-6739_SE_aln_sorted.q20 Dug-pl-6741_SE_aln_sorted.q20 Dug-pl-6742_SE_aln_sorted.q20 Dug-pl-6743_SE_aln_sorted.q20 Dug-pl-6744_SE_aln_sorted.q20 Dug-pl-6745_SE_aln_sorted.q20 Dug-pl-6746_SE_aln_sorted.q20 Dug-pl-6747_SE_aln_sorted.q20 Dug-pl-6748_SE_aln_sorted.q20 Eck-5329_SE_aln_sorted.q20 Eck-5331_SE_aln_sorted.q20 Eck-5332_SE_aln_sorted.q20 Eck-5333_SE_aln_sorted.q20 Eck-5334_SE_aln_sorted.q20 Eck-5335_SE_aln_sorted.q20 Eck-5337_SE_aln_sorted.q20 Eck-5338_SE_aln_sorted.q20 Eck-5339_SE_aln_sorted.q20 Eck-5340_SE_aln_sorted.q20 Eck-5341_SE_aln_sorted.q20 Eck-5342_SE_aln_sorted.q20 Eck-5345_SE_aln_sorted.q20 Eck-5347_SE_aln_sorted.q20 Eck-5348_SE_aln_sorted.q20 Eck-5436_SE_aln_sorted.q20 Eck-5438_SE_aln_sorted.q20 Eck-5439_SE_aln_sorted.q20 Eck-5440_SE_aln_sorted.q20 Lubnaig-5349_SE_aln_sorted.q20 Lubnaig-5350_SE_aln_sorted.q20 Lubnaig-5351_SE_aln_sorted.q20 Lubnaig-5352_SE_aln_sorted.q20 Lubnaig-5355_SE_aln_sorted.q20 Lubnaig-5356_SE_aln_sorted.q20 Lubnaig-5357_SE_aln_sorted.q20 Lubnaig-5358_SE_aln_sorted.q20 Lubnaig-5359_SE_aln_sorted.q20 Lubnaig-5360_SE_aln_sorted.q20 Lubnaig-5361_SE_aln_sorted.q20 Lubnaig-5363_SE_aln_sorted.q20 Lubnaig-5364_SE_aln_sorted.q20 Lubnaig-5365_SE_aln_sorted.q20 Lubnaig-5367_SE_aln_sorted.q20 Lubnaig-5368_SE_aln_sorted.q20 Lubnaig-5369_SE_aln_sorted.q20 Lubnaig-5370_SE_aln_sorted.q20 Lubnaig-5371_SE_aln_sorted.q20 Lubnaig-5372_SE_aln_sorted.q20 Merk-5405_SE_aln_sorted.q20 Merk-5413_SE_aln_sorted.q20 Merk_5398_SE_aln_sorted.q20 Merk_5399_SE_aln_sorted.q20 Merk_5400_SE_aln_sorted.q20 Merk_5401_SE_aln_sorted.q20 Merk_5402_SE_aln_sorted.q20 Merk_5403_SE_aln_sorted.q20 Merk_5404_SE_aln_sorted.q20 Merk_5405_SE_aln_sorted.q20 Merk_5406_SE_aln_sorted.q20 Merk_5407_SE_aln_sorted.q20 Merk_5409_SE_aln_sorted.q20 Merk_5410_SE_aln_sorted.q20 Merk_5411_SE_aln_sorted.q20 Merk_5413_SE_aln_sorted.q20 Merk_5428_SE_aln_sorted.q20 Merk_5429_SE_aln_sorted.q20 Merk_5430_SE_aln_sorted.q20 Merk_5431_SE_aln_sorted.q20 Merk_5432_SE_aln_sorted.q20 Merk_5433_SE_aln_sorted.q20 Rannoch-C11_SE_aln_sorted.q20 Rannoch-C148_SE_aln_sorted.q20 Rannoch-C2_SE_aln_sorted.q20 Rannoch-C7_SE_aln_sorted.q20 Rannoch-MM2_SE_aln_sorted.q20 Rannoch-MM3_SE_aln_sorted.q20 Rannoch-MM4_SE_aln_sorted.q20 Rannoch-MM5_SE_aln_sorted.q20 Rannoch-RPL1_SE_aln_sorted.q20 Rannoch-RPL2_SE_aln_sorted.q20 Rannoch-RPL5_SE_aln_sorted.q20 Tay_LP_2221_SE_aln_sorted.q20 Tay_LP_2250_SE_aln_sorted.q20 Tay_LP_2251_SE_aln_sorted.q20 Tay_LP_2252_SE_aln_sorted.q20 Tay_LP_2253_SE_aln_sorted.q20 Tay_LP_2254_SE_aln_sorted.q20 Tay_LP_2255_SE_aln_sorted.q20 Tay_LP_2256_SE_aln_sorted.q20 Tay_LP_2257_SE_aln_sorted.q20 Tay_LP_2258_SE_aln_sorted.q20 Tay_LP_2259_SE_aln_sorted.q20 Tay_LP_2265_SE_aln_sorted.q20 Tay_LP_2285_SE_aln_sorted.q20 Tay_LP_2287_SE_aln_sorted.q20 Tay_LP_2288_SE_aln_sorted.q20 Tay_LP_2290_SE_aln_sorted.q20 Tay_LP_2292_SE_aln_sorted.q20 Tay_LP_2293_SE_aln_sorted.q20 Tay_LP_2295_SE_aln_sorted.q20 Tay_LP_2297_SE_aln_sorted.q20 Tay_LP_2298_SE_aln_sorted.q20 Tay_LP_2299_SE_aln_sorted.q20 Tay_LP_2300_SE_aln_sorted.q20 Tay_LP_2301_SE_aln_sorted.q20 Tay_LP_2302_SE_aln_sorted.q20 Tay_LP_2303_SE_aln_sorted.q20 Tay_LP_2305_SE_aln_sorted.q20 Tay_LP_2306_SE_aln_sorted.q20 Tay_LP_2307_SE_aln_sorted.q20 Tay_LP_2308_SE_aln_sorted.q20 Tay_LP_2309_SE_aln_sorted.q20 Tay_SB_2216_SE_aln_sorted.q20 Tay_SB_2219_SE_aln_sorted.q20 Tay_SB_2222_SE_aln_sorted.q20 Tay_SB_2224_SE_aln_sorted.q20 Tay_SB_2227_SE_aln_sorted.q20 Tay_SB_2236_SE_aln_sorted.q20 Tay_SB_2239_SE_aln_sorted.q20 Tay_SB_2240_SE_aln_sorted.q20 Tay_SB_2246_SE_aln_sorted.q20 Tay_SB_2247_SE_aln_sorted.q20 Tay_SB_2268_SE_aln_sorted.q20 Tay_SB_2269_SE_aln_sorted.q20 Tay_SB_2270_SE_aln_sorted.q20 Tay_SB_2272_SE_aln_sorted.q20 Tay_SB_2273_SE_aln_sorted.q20 Tay_SB_2277_SE_aln_sorted.q20 Tay_SB_2278_SE_aln_sorted.q20 Tay_SB_2279_SE_aln_sorted.q20 Tay_SB_2282_SE_aln_sorted.q20 Tay_SB_2283_SE_aln_sorted.q20 Tay_SB_2284_SE_aln_sorted.q20 Uaine-5373_SE_aln_sorted.q20 Uaine-5374_SE_aln_sorted.q20 Uaine-5375_SE_aln_sorted.q20 Uaine-5376_SE_aln_sorted.q20 Uaine-5377_SE_aln_sorted.q20 Uaine-5378_SE_aln_sorted.q20 Uaine-5379_SE_aln_sorted.q20 Uaine-5380_SE_aln_sorted.q20 Uaine-5381_SE_aln_sorted.q20 Uaine-5382_SE_aln_sorted.q20 Uaine-5383_SE_aln_sorted.q20 Uaine-5384_SE_aln_sorted.q20 Uaine-5385_SE_aln_sorted.q20 Uaine-5386_SE_aln_sorted.q20 Uaine-5387_SE_aln_sorted.q20 Uaine-5388_SE_aln_sorted.q20 Uaine-5389_SE_aln_sorted.q20 Uaine-5390_SE_aln_sorted.q20 Uaine-5391_SE_aln_sorted.q20 Uaine-5392_SE_aln_sorted.q20 Uaine_5388_SE_aln_sorted.q20 Uaine_5389_SE_aln_sorted.q20 Uaine_5390_SE_aln_sorted.q20 naSeal-bn-5177_SE_aln_sorted.q20 naSeal-bn-5182_SE_aln_sorted.q20 naSeal-bn-5184_SE_aln_sorted.q20 naSeal-bn-5185_SE_aln_sorted.q20 naSeal-bn-5189_SE_aln_sorted.q20 naSeal-bn-5191_SE_aln_sorted.q20 naSeal-bn-5201_SE_aln_sorted.q20 naSeal-bn-5212_SE_aln_sorted.q20 naSeal-bn-5214_SE_aln_sorted.q20 naSeal-bn-5215_SE_aln_sorted.q20 naSeal-bn-5220_SE_aln_sorted.q20 naSeal-bn-5221_SE_aln_sorted.q20 naSeal-bn-5224_SE_aln_sorted.q20 naSeal-bn-5225_SE_aln_sorted.q20 naSeal-bn-5226_SE_aln_sorted.q20 naSeal-bn-5227_SE_aln_sorted.q20 naSeal-bn-5228_SE_aln_sorted.q20 naSeal-bn-5230_SE_aln_sorted.q20 naSeal-bn-5232_SE_aln_sorted.q20 naSeal-pl-5176_SE_aln_sorted.q20 naSeal-pl-5178_SE_aln_sorted.q20 naSeal-pl-5187_SE_aln_sorted.q20 naSeal-pl-5188_SE_aln_sorted.q20 naSeal-pl-5190_SE_aln_sorted.q20 naSeal-pl-5192_SE_aln_sorted.q20 naSeal-pl-5195_SE_aln_sorted.q20 naSeal-pl-5196_SE_aln_sorted.q20 naSeal-pl-5197_SE_aln_sorted.q20 naSeal-pl-5198_SE_aln_sorted.q20 naSeal-pl-5199_SE_aln_sorted.q20 naSeal-pl-5200_SE_aln_sorted.q20 naSeal-pl-5202_SE_aln_sorted.q20 naSeal-pl-5205_SE_aln_sorted.q20 naSeal-pl-5206_SE_aln_sorted.q20 naSeal-pl-5207_SE_aln_sorted.q20 naSeal-pl-5208_SE_aln_sorted.q20 naSeal-pl-5210_SE_aln_sorted.q20 naSeal-pl-5211_SE_aln_sorted.q20 naSeal-pl-5216_SE_aln_sorted.q20 naSeal-pl-5217_SE_aln_sorted.q20 Contig0 1065246 4_30 T C . PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . GT:DP:AD 1/1:32:0,32 1/1:28:0,28 0/1:22:9,13 0/1:50:18,32 0/1:39:17,22 1/1:18:0,18 1/1:22:0,22 0/1:37:9,28 0/0:24:24,0 1/1:32:0,32 1/1:30:0,30 1/1:22:0,22 1/1:25:0,25 0/1:16:10,6 0/1:27:19,8 0/1:28:17,11 1/1:32:0,32 0/1:26:10,16 0/1:26:12,14 0/1:23:13,10 0/1:29:12,17 1/1:32:0,32 0/1:22:13,9 1/1:26:0,26 0/1:25:12,13 0/1:38:26,12 0/1:35:14,21 1/1:34:0,34 1/1:44:0,44 1/1:34:0,34 1/1:30:0,30 0/1:18:11,7 1/1:29:0,29 1/1:29:0,29 1/1:24:0,24 1/1:36:0,36 1/1:23:0,23 1/1:31:0,31 1/1:28:0,28 0/0:28:28,0 1/1:53:0,53 0/1:42:24,18 0/1:30:16,14 0/1:24:10,14 1/1:21:0,21 1/1:25:0,25 0/1:33:19,14 1/1:22:0,22 1/1:24:0,24 1/1:34:0,34 0/1:24:10,14 0/1:27:12,15 0/1:35:20,15 ./.:12:.,. 0/0:20:20,0 0/0:15:15,0 0/0:9:9,0 0/0:16:16,0 0/0:14:14,0 0/0:8:8,0 0/0:15:15,0 0/0:21:21,0 0/0:16:16,0 0/0:19:19,0 0/0:13:13,0 0/0:19:19,0 0/0:16:16,0 0/0:22:22,0 0/0:24:24,0 0/0:23:23,0 0/0:15:15,0 0/0:16:16,0 0/0:15:15,0 0/0:14:14,0 0/0:8:8,0 0/0:10:10,0 0/0:21:21,0 0/0:22:22,0 0/0:22:22,0 0/0:17:17,0 0/0:16:16,0 0/0:11:11,0 0/0:16:16,0 0/0:18:18,0 0/0:17:17,0 0/0:22:22,0 0/0:14:14,0 0/0:14:14,0 0/0:9:9,0 0/0:17:17,0 0/1:14:4,10 0/0:11:11,0 0/0:19:19,0 0/1:17:10,7 0/0:12:12,0 0/0:9:9,0 0/0:13:13,0 0/0:26:26,0 0/0:16:16,0 0/0:30:30,0 0/0:9:9,0 0/0:6:6,0 0/0:21:21,0 0/0:11:11,0 0/0:12:12,0 0/0:17:17,0 0/0:18:18,0 0/0:16:16,0 0/0:16:16,0 0/0:25:25,0 0/0:22:22,0 0/0:13:13,0 ./.:0:.,. 1/1:47:0,47 0/0:19:19,0 1/1:23:0,23 1/1:16:0,16 0/0:24:24,0 1/1:19:0,19 1/1:25:0,25 1/1:20:0,20 1/1:15:0,15 0/0:9:9,0 ./.:0:.,. 0/1:29:15,14 1/1:17:0,17 1/1:22:0,22 0/1:30:18,12 ./.:0:.,. 1/1:10:0,10 0/1:13:7,6 0/1:8:4,4 0/1:24:12,12 0/0:21:21,0 ./.:0:.,. 0/0:25:25,0 0/0:9:9,0 0/0:16:16,0 0/0:45:45,0 0/0:13:13,0 0/0:8:8,0 0/0:14:14,0 0/0:9:9,0 0/1:32:19,13 ./.:0:.,. 0/0:25:25,0 0/0:24:24,0 0/0:7:7,0 0/0:42:42,0 0/0:20:20,0 0/0:15:15,0 0/1:9:6,3 ./.:0:.,. 0/1:19:6,13 1/1:81:0,81 0/1:49:19,30 0/0:24:24,0 1/1:11:0,11 0/1:31:13,18 0/1:15:8,7 0/0:30:30,0 1/1:16:0,16 0/1:14:6,8 0/0:42:42,0 1/1:35:0,35 0/1:33:14,19 1/1:50:0,50 0/1:18:11,7 0/1:46:24,22 1/1:56:0,56 1/1:18:0,18 0/1:59:30,29 0/1:83:45,38 0/1:60:37,23 0/0:13:13,0 0/0:21:21,0 0/0:23:23,0 0/0:6:6,0 0/0:16:16,0 0/0:6:6,0 0/0:8:8,0 0/0:18:18,0 0/1:11:5,6 ./.:7:.,. 0/1:13:5,8 0/1:35:19,16 0/0:34:34,0 0/1:36:15,21 0/0:37:37,0 0/1:19:9,10 0/1:19:11,8 0/1:21:15,6 0/1:38:14,24 0/1:21:10,11 1/1:29:0,29 0/0:28:28,0 0/0:24:24,0 0/1:27:12,15 0/1:32:16,16 0/1:34:15,19 0/1:30:12,18 1/1:27:0,27 0/1:35:14,21 0/1:46:22,24 1/1:38:0,38 0/1:24:14,10 0/1:21:9,12 0/0:38:38,0 0/1:41:21,20 0/1:36:18,18 1/1:40:0,40 0/1:60:30,30 0/0:39:39,0 1/1:36:0,36 0/1:37:21,16 0/0:22:22,0 0/0:37:37,0 0/0:21:21,0 0/0:29:29,0 0/0:56:56,0 0/0:24:24,0 0/0:39:39,0 0/0:22:22,0 0/0:27:27,0 0/0:32:32,0 0/0:38:38,0 0/0:49:49,0 0/0:23:23,0 0/0:21:21,0 0/0:26:26,0 0/0:20:20,0 0/0:35:35,0 0/0:28:28,0 0/0:37:37,0 0/0:32:32,0 0/0:39:39,0 0/0:26:26,0 0/0:32:32,0 0/0:11:11,0 0/0:28:28,0 0/1:17:11,6 0/0:13:13,0 0/0:20:20,0 0/1:19:7,12 0/0:20:20,0 0/0:21:21,0 0/1:22:12,10 0/0:28:28,0 0/0:31:31,0 0/1:23:13,10 0/1:27:14,13 0/0:24:24,0 0/0:11:11,0 0/0:12:12,0 0/0:15:15,0 0/0:9:9,0 0/0:9:9,0 0/0:13:13,0 0/0:13:13,0 0/0:10:10,0 0/0:21:21,0 0/0:26:26,0 0/0:42:42,0 0/0:35:35,0 0/0:29:29,0 0/0:30:30,0 0/0:55:55,0 0/0:35:35,0 0/0:13:13,0 0/0:39:39,0 0/0:20:20,0 0/0:22:22,0 0/0:25:25,0 0/0:29:29,0 0/0:24:24,0 0/0:7:7,0 0/0:32:32,0 0/0:30:30,0 0/0:20:20,0 0/0:44:44,0 0/0:32:32,0 0/0:39:39,0 0/0:34:34,0 0/0:20:20,0 0/0:45:45,0 0/0:27:27,0 0/0:16:16,0 0/0:19:19,0 0/0:20:20,0 0/0:13:13,0 0/0:27:27,0 0/0:25:25,0 0/0:24:24,0 0/0:26:26,0 0/0:20:20,0 0/0:32:32,0 0/0:40:40,0 0/0:24:24,0 0/0:28:28,0 0/0:22:22,0 Contig1967 723923 22413_18 A C . PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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Contig2055 5838 23487_36 T C . PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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GT:DP:AD 1/1:16:0,16 0/1:23:13,10 1/1:15:0,15 1/1:22:0,22 1/1:25:0,25 1/1:21:0,21 ./.:28:.,. 1/1:19:0,19 0/1:17:5,12 0/1:18:11,7 1/1:24:0,24 1/1:11:0,11 1/1:21:0,21 1/1:6:0,6 0/1:13:8,5 1/1:30:0,30 0/1:22:13,9 0/1:32:18,14 0/1:23:11,12 1/1:15:0,15 1/1:18:0,18 1/1:15:0,15 0/1:30:20,10 1/1:19:0,19 0/0:21:21,0 1/1:22:0,22 1/1:36:0,36 0/1:28:15,13 0/0:27:27,0 0/1:35:17,18 0/1:22:12,10 0/0:26:26,0 0/1:18:9,9 0/1:33:16,17 0/1:28:16,12 0/1:32:17,15 0/1:15:7,8 0/0:35:35,0 0/1:17:8,9 0/0:29:29,0 0/1:32:20,12 0/1:22:10,12 0/1:20:10,10 1/1:25:0,25 1/1:13:0,13 1/1:15:0,15 1/1:22:0,22 1/1:18:0,18 1/1:17:0,17 0/0:21:21,0 0/1:21:9,12 0/1:22:10,12 1/1:15:0,15 0/0:24:24,0 0/0:24:24,0 0/0:20:20,0 0/0:9:9,0 0/0:15:15,0 0/0:16:16,0 ./.:0:.,. 0/0:12:12,0 0/0:15:15,0 0/0:19:19,0 0/0:16:16,0 0/1:13:6,7 0/1:22:10,12 0/0:14:14,0 0/0:21:21,0 0/0:18:18,0 0/0:18:18,0 0/1:7:4,3 0/0:13:13,0 0/0:20:20,0 0/0:10:10,0 0/0:16:16,0 0/0:9:9,0 0/1:19:9,10 0/0:15:15,0 0/0:20:20,0 1/1:18:0,18 ./.:0:.,. 0/0:11:11,0 0/0:8:8,0 0/0:21:21,0 0/1:21:12,9 0/1:13:4,9 1/1:13:0,13 1/1:12:0,12 0/1:16:8,8 0/0:14:14,0 1/1:11:0,11 0/0:14:14,0 0/0:17:17,0 0/1:18:13,5 0/0:14:14,0 ./.:0:.,. 0/1:9:6,3 0/0:21:21,0 0/1:19:13,6 0/1:17:10,7 0/0:14:14,0 0/1:8:4,4 0/0:21:21,0 0/1:19:7,12 0/0:21:21,0 0/1:16:7,9 ./.:7:.,. 0/1:15:6,9 0/0:15:15,0 0/1:19:14,5 0/0:16:16,0 0/0:18:18,0 ./.:0:.,. 0/0:45:45,0 0/0:24:24,0 0/0:39:39,0 0/0:18:18,0 0/0:10:10,0 0/0:17:17,0 0/0:21:21,0 0/0:23:23,0 0/0:16:16,0 0/0:19:19,0 0/0:6:6,0 0/0:51:51,0 0/0:10:10,0 0/0:21:21,0 0/0:58:58,0 ./.:0:.,. ./.:0:.,. 0/0:9:9,0 0/0:7:7,0 0/1:21:13,8 1/1:14:0,14 ./.:0:.,. 1/1:24:0,24 1/1:7:0,7 0/1:24:15,9 0/0:30:30,0 0/1:20:13,7 ./.:0:.,. 1/1:10:0,10 0/1:18:11,7 1/1:22:0,22 ./.:0:.,. 1/1:27:0,27 1/1:13:0,13 1/1:13:0,13 0/1:46:17,29 1/1:10:0,10 1/1:6:0,6 0/1:14:8,6 ./.:0:.,. 0/1:9:5,4 1/1:33:0,33 0/1:48:28,20 1/1:17:0,17 1/1:16:0,16 1/1:18:0,18 1/1:11:0,11 0/1:35:16,19 1/1:12:0,12 1/1:19:0,19 0/1:33:16,17 0/1:18:8,10 1/1:29:0,29 1/1:43:0,43 ./.:0:.,. 1/1:40:0,40 1/1:11:0,11 ./.:14:.,. 1/1:18:0,18 0/1:32:16,16 1/1:29:0,29 0/1:10:3,7 0/0:14:14,0 0/0:24:24,0 ./.:0:.,. 0/0:21:21,0 0/1:15:5,10 0/1:14:8,6 1/1:11:0,11 0/0:6:6,0 0/0:8:8,0 0/0:16:16,0 0/0:22:22,0 1/1:24:0,24 0/0:26:26,0 0/1:27:19,8 0/1:13:6,7 0/0:26:26,0 0/0:17:17,0 0/1:19:10,9 0/0:21:21,0 0/1:17:11,6 1/1:19:0,19 0/1:11:6,5 0/1:30:16,14 0/1:20:8,12 0/0:20:20,0 0/1:32:18,14 0/1:21:16,5 1/1:37:0,37 0/0:40:40,0 0/1:35:20,15 0/0:22:22,0 0/0:20:20,0 0/1:32:18,14 0/0:39:39,0 0/0:50:50,0 0/1:29:17,12 0/0:33:33,0 0/1:38:26,12 0/1:30:13,17 1/1:37:0,37 0/0:32:32,0 0/0:26:26,0 0/0:24:24,0 0/0:29:29,0 0/0:42:42,0 0/0:30:30,0 0/0:37:37,0 0/0:16:16,0 0/0:20:20,0 0/0:35:35,0 0/0:28:28,0 0/0:33:33,0 0/0:24:24,0 0/0:23:23,0 0/0:25:25,0 0/0:16:16,0 0/0:22:22,0 0/0:27:27,0 0/0:24:24,0 0/0:22:22,0 0/0:49:49,0 0/0:32:32,0 0/0:41:41,0 0/0:14:14,0 0/0:34:34,0 0/0:16:16,0 0/0:15:15,0 0/0:22:22,0 0/0:7:7,0 0/0:28:28,0 0/0:24:24,0 0/0:31:31,0 0/0:29:29,0 0/0:32:32,0 0/0:26:26,0 0/0:29:29,0 0/0:28:28,0 0/0:8:8,0 0/0:17:17,0 0/0:10:10,0 0/0:6:6,0 0/0:13:13,0 0/0:6:6,0 ./.:0:.,. 0/0:7:7,0 0/1:18:7,11 0/1:21:13,8 1/1:48:0,48 0/1:40:23,17 0/1:45:25,20 0/0:34:34,0 0/1:45:24,21 0/1:25:12,13 0/1:12:5,7 0/0:47:47,0 ./.:17:.,. 0/1:31:15,16 0/1:19:7,12 0/1:35:18,17 0/0:18:18,0 0/1:6:3,3 1/1:38:0,38 1/1:32:0,32 0/1:61:28,33 1/1:33:0,33 0/1:22:9,13 0/1:35:14,21 1/1:25:0,25 0/1:27:14,13 1/1:33:0,33 0/1:18:10,8 0/1:14:7,7 0/1:24:14,10 1/1:23:0,23 0/1:15:7,8 0/1:35:13,22 1/1:34:0,34 1/1:35:0,35 1/1:31:0,31 0/0:39:39,0 0/1:28:8,20 1/1:30:0,30 0/0:48:48,0 1/1:50:0,50 0/1:18:10,8 Contig26 4670142 30108_19 A C . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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Contig3235 11712 35937_11 A G . PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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Contig4077 56007 42245_39 T C . PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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Contig5439 61761 47579_19 A C . PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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Contig5989 30970 49745_14 A G . PASS . 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PASS . GT:DP:AD 1/1:16:0,16 0/1:16:10,6 0/1:19:10,9 0/1:21:11,10 0/0:31:31,0 1/1:13:0,13 0/1:26:10,16 1/1:16:0,16 1/1:21:0,21 0/1:18:13,5 0/1:23:17,6 1/1:16:0,16 1/1:24:0,24 1/1:19:0,19 1/1:25:0,25 1/1:24:0,24 1/1:23:0,23 1/1:21:0,21 0/1:30:13,17 1/1:21:0,21 1/1:34:0,34 0/0:24:24,0 0/1:21:9,12 0/1:31:21,10 1/1:13:0,13 0/1:25:13,12 0/1:31:17,14 1/1:35:0,35 1/1:26:0,26 0/1:29:14,15 1/1:27:0,27 0/1:25:11,14 1/1:27:0,27 1/1:20:0,20 1/1:19:0,19 0/0:24:24,0 1/1:13:0,13 0/1:32:14,18 0/0:21:21,0 1/1:27:0,27 0/1:35:15,20 1/1:19:0,19 0/1:22:13,9 1/1:34:0,34 0/1:16:9,7 1/1:28:0,28 1/1:32:0,32 1/1:12:0,12 1/1:31:0,31 1/1:16:0,16 1/1:25:0,25 1/1:21:0,21 0/0:20:20,0 0/0:24:24,0 0/1:21:15,6 1/1:18:0,18 0/1:9:5,4 0/1:9:4,5 1/1:15:0,15 0/1:8:5,3 0/0:16:16,0 0/0:22:22,0 0/1:17:8,9 1/1:26:0,26 1/1:9:0,9 1/1:15:0,15 1/1:14:0,14 1/1:21:0,21 0/1:19:5,14 0/1:20:7,13 ./.:0:.,. 0/1:25:14,11 0/1:15:8,7 1/1:19:0,19 1/1:11:0,11 1/1:13:0,13 1/1:24:0,24 0/1:17:10,7 1/1:15:0,15 1/1:16:0,16 0/1:13:6,7 0/1:11:6,5 1/1:16:0,16 0/0:17:17,0 ./.:8:.,. 0/1:21:14,7 1/1:21:0,21 0/1:17:8,9 0/1:12:5,7 0/1:17:8,9 0/1:12:7,5 0/0:9:9,0 0/0:19:19,0 ./.:17:.,. 0/0:15:15,0 0/1:8:4,4 0/0:12:12,0 0/0:20:20,0 0/0:19:19,0 0/0:17:17,0 0/0:10:10,0 0/0:13:13,0 0/1:18:9,9 0/1:15:10,5 1/1:20:0,20 ./.:14:.,. 0/1:22:13,9 0/0:15:15,0 0/1:12:7,5 0/0:15:15,0 0/1:28:15,13 0/1:13:6,7 ./.:0:.,. 0/1:43:25,18 0/1:37:13,24 1/1:31:0,31 0/1:22:11,11 0/0:26:26,0 0/1:21:12,9 0/1:26:11,15 0/1:41:21,20 1/1:27:0,27 0/0:20:20,0 1/1:6:0,6 1/1:45:0,45 0/1:17:9,8 0/0:33:33,0 0/1:56:22,34 0/1:8:5,3 ./.:0:.,. 0/0:19:19,0 0/0:14:14,0 1/1:47:0,47 1/1:19:0,19 ./.:0:.,. 1/1:23:0,23 1/1:14:0,14 1/1:29:0,29 1/1:36:0,36 1/1:36:0,36 1/1:13:0,13 1/1:24:0,24 1/1:17:0,17 1/1:51:0,51 ./.:0:.,. 1/1:31:0,31 1/1:22:0,22 1/1:16:0,16 1/1:59:0,59 1/1:24:0,24 1/1:47:0,47 1/1:17:0,17 0/1:8:3,5 1/1:16:0,16 0/1:38:11,27 0/1:53:28,25 0/1:14:7,7 1/1:8:0,8 1/1:17:0,17 0/0:33:33,0 1/1:34:0,34 0/1:29:7,22 0/1:39:15,24 1/1:35:0,35 0/1:21:13,8 0/1:25:16,9 0/1:39:24,15 1/1:10:0,10 0/1:34:20,14 1/1:14:0,14 0/0:15:15,0 1/1:27:0,27 0/1:35:23,12 0/1:26:11,15 0/0:18:18,0 0/0:21:21,0 0/1:22:11,11 ./.:0:.,. 0/0:22:22,0 0/0:10:10,0 0/0:21:21,0 0/0:12:12,0 0/0:14:14,0 0/0:19:19,0 0/0:26:26,0 0/0:27:27,0 0/0:31:31,0 0/0:26:26,0 0/0:21:21,0 0/1:22:13,9 0/1:34:19,15 0/0:12:12,0 0/0:29:29,0 0/0:18:18,0 0/1:26:15,11 0/0:30:30,0 0/0:21:21,0 0/0:19:19,0 0/0:23:23,0 0/1:24:13,11 0/0:31:31,0 0/0:27:27,0 0/0:46:46,0 0/0:38:38,0 0/0:39:39,0 0/0:22:22,0 0/0:18:18,0 0/1:32:13,19 0/1:27:17,10 0/0:30:30,0 0/1:31:16,15 1/1:27:0,27 0/1:37:16,21 0/0:43:43,0 0/0:35:35,0 0/0:31:31,0 0/0:24:24,0 0/0:20:20,0 0/0:23:23,0 0/0:42:42,0 0/0:23:23,0 0/0:30:30,0 0/0:17:17,0 0/0:17:17,0 0/0:25:25,0 0/0:37:37,0 0/0:30:30,0 0/0:23:23,0 0/0:31:31,0 0/0:24:24,0 0/0:29:29,0 0/0:18:18,0 0/0:30:30,0 0/0:23:23,0 0/0:29:29,0 0/0:34:34,0 0/0:30:30,0 0/0:36:36,0 0/0:18:18,0 0/0:47:47,0 0/0:14:14,0 0/0:21:21,0 0/0:20:20,0 0/0:17:17,0 0/0:32:32,0 0/0:20:20,0 0/0:52:52,0 0/0:28:28,0 0/0:42:42,0 0/0:22:22,0 0/0:38:38,0 0/0:31:31,0 0/0:8:8,0 0/0:9:9,0 0/0:14:14,0 0/0:11:11,0 0/0:8:8,0 0/0:7:7,0 0/0:14:14,0 ./.:0:.,. 0/0:26:26,0 0/1:38:16,22 1/1:36:0,36 0/0:27:27,0 0/0:37:37,0 0/1:19:11,8 0/0:44:44,0 0/1:23:11,12 ./.:7:.,. 1/1:39:0,39 0/0:34:34,0 0/1:21:9,12 0/1:39:20,19 0/0:32:32,0 0/1:12:7,5 0/0:14:14,0 0/1:45:17,28 0/1:65:32,33 0/0:40:40,0 0/1:23:6,17 0/1:25:11,14 0/0:34:34,0 0/1:22:9,13 0/0:30:30,0 0/1:43:22,21 0/1:22:11,11 0/1:24:10,14 0/0:19:19,0 0/0:22:22,0 0/0:17:17,0 0/1:38:20,18 0/0:30:30,0 0/0:32:32,0 0/1:25:12,13 0/0:25:25,0 1/1:40:0,40 0/0:38:38,0 0/0:36:36,0 0/0:44:44,0 0/1:23:14,9 Contig600 122314 49793_30 T C . PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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Contig70 893253 55696_26 G C . PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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Contig889 1096731 62472_31 T A . PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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PASS . 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